• Skip to primary navigation
  • Skip to main content
  • Skip to primary sidebar
  • meet the team
  • blogger resources
  • Contact Me
My Account
Member Dashboard
40 Aprons Premium (Ad Free!)

40 Aprons

Delicious, Healthy-ish Meals for the Whole Family

  • All Recipes
  • Course
    • Appetizers
    • Cooking Basics
    • Breakfast
    • Condiments
    • Dessert
    • Main Course
    • Meal Prep
    • Side Dishes
    • Soups
  • Method
    • Air Fryer
    • Baking
    • Crockpot
    • Grilling
    • Instant Pot
    • Sous Vide
  • Dietary Needs
    • Dairy Free
    • Gluten Free
    • Keto
    • Low Carb
    • Paleo
    • Vegan
    • Vegetarian
    • Whole30
  • Cuisine
    • American
    • Asian
    • Indian
    • Italian
    • Mediterranean
    • Mexican & Latin
    • Southern
Home Blog Course Dessert

Healthy Pumpkin Muffins with Crumb Topping

Cheryl Malik
Cheryl Malik Posted: 09/30/19 Updated: 03/22/22
4.97
/5
68 Comments
Jump to Recipe
DF Dairy Free GF Gluten Free P Paleo VG Vegetarian

This post may contain affiliate links. Please read our disclosure policy.

Healthy pumpkin muffins Pinterest graphic
Healthy pumpkin muffins Pinterest graphic
Healthy pumpkin muffins Pinterest graphic
Healthy pumpkin muffins Pinterest graphic

These healthy paleo pumpkin muffins are perfectly tender and moist with the most delicious crumb topping. You’d never know they’re actually paleo, gluten free, and grain free! They’re easy to make, so they’re perfect for fall baking that tastes and feels oh so good.

Two healthy pumpkin muffins stacked on top of eachother

Why These Muffins Are So Good

  • They really taste like “normal” muffins and the crumb topping is out of this world!
  • Tender and moist with a delicate crumb, it’s hard to believe they are also gluten free, grain free, and dairy free.
  • They are easy and quick to throw together, making them perfect for whipping up for breakfast, snacks, or even a bake sale!

Why You’ll Never Know These Are Healthy

The texture of these muffins are out of this world! You honestly wouldn’t believe they are paleo, let alone gluten-free! They are perfectly moist and crumbly and packed full of the flavors of fall! Super easy to make and a hit with the whole family!

A muffin with a bite taken out of it

What Makes These Muffins Paleo?

These muffins contain all of the fall flavors you would expect to find in a regular recipe, but a few swaps have been made to make these pumpkin muffins a healthier option.

  • A blend of almond flour, coconut flour and tapioca makes these muffins gluten-free.
  • Coconut sugar is used instead of granulated – it’s less processed and has a lower glycemic index.
  • Coconut oil is used in place of butter to make these muffins dairy-free.

Why These Are Perfect for Fall

The flavor of these muffins is exactly what I love about fall, or as I like to call it, pumpkin spice season! You can use a pre mixed spice or make your own, which is a great option if you are baking more than one batch!

Chef’s Tips

  • You can mix the healthy pumpkin muffin ingredients easily by hand, or use a stand mixer on a low speed.
  • You can substitute the coconut oil for butter or vegan butter.
  • Bake the muffins in a fully preheated oven for the best results.
  • Let the muffins cool completely before serving.
Half of a healthy pumpkin muffin stacked on top of another

Other Delicious Muffin Recipes You’ll Love

  • Paleo Blueberry Muffins
  • Gluten-Free Muffins for Kids
  • Paleo Pumpkin Chocolate Chip Muffins with Cream Cheese Frosting (Dairy-Free, GF)
  • Peach Ginger Paleo Muffins (Gluten-Free, Grain-Free, Dairy-Free)
  • Healthy Lemon Muffins

Hey – you’ve made it this far, and now we’re best friends! If you make this recipe, I’d love for you to give it a star rating ★ below. Make sure you follow me on Instagram, Pinterest, and Facebook, too!

Hey – you’ve made it this far, so now we’re basically best friends! If you make this recipe, I’d love for you to give it a quick review & star rating ★ below. Make sure you follow me on Instagram, Pinterest, TikTok, and Facebook, too!

Two healthy pumpkin muffins stacked on top of eachother
4.97 from 29 votes

Healthy Pumpkin Muffins

Prep:10 minutes
Cook:25 minutes
Total:35 minutes
These healthy paleo pumpkin muffins are perfectly tender and moist with the most delicious crumb topping. You'd never know they're actually paleo, gluten free, and grain free! They're easy to make, so they're perfect for fall baking that tastes and feels oh so good.
Print Save Saved! Click Here to Remove Ads
12 muffins

Ingredients

For the Muffins

  • 2  cups  almond flour
  • ½ cup tapioca starch
  • ¼ cup coconut flour
  • ¼ teaspoon  sea salt
  • ½ cup  coconut sugar
  • 1 teaspoons  cinnamon
  • 1  teaspoon  pumpkin pie spice or to taste
  • 1 ½ teaspoons baking soda
  • 3  large eggs  lightly whisked
  • ¼ cup  unsweetened almond milk
  • 2  teaspoon  vanilla extract
  • 1  cup  pumpkin purée
  • ½ cup coconut oil or butter (vegan is fine); melted & cooled slightly

For the Crumb Topping

  • 2  tablespoons coconut oil at room temperature
  • 4  tablespoons  almond flour
  • 4  tablespoons  coconut sugar
  • ½ teaspoon  cinnamon
  • ¼ teaspoon pumpkin pie spice
  • 1 pinch  salt

Instructions 

  • Preheat the oven to 325° Fahrenheit. Line a muffin tin with parchment paper liners and set aside.
  • Combine the crumb mixture ingredients in a bowl with a fork until combined (it should look like crumbs) then chill while you prepare muffin batter.
  • In a large bowl, combine flours, tapioca, salt, coconut sugar, cinnamon, pumpkin pie spice, and baking soda and whisk until well combined and no lumps remain. Add in remaining muffin ingredients, and mix with a spatula until well combined.
  • Spoon into prepared muffin tin until almost entirely full, rounding at the top. I use a disher for this purpose. Top each muffin with the crumb mixture, about a teaspoon over each muffin.
  • Bake at 325° in the middle rack for 23-25 minutes, or until a toothpick inserted in the center of the muffins comes out clean AND the surface of the muffin springs back when touched. Remove and let cool slightly, then transfer to a wire cooling rack to cool completely.

Notes

Recipe yields approximately 12 servings. Actual number of servings will depend on your preferred portion sizes.
Nutritional values shown are general guidelines and reflect information for 1 serving using the ingredients listed. Actual macros may vary slightly depending on specific brands and types of ingredients used.
To determine the weight of one serving, prepare the recipe as instructed. Weigh the finished recipe, then divide the weight of the finished recipe (not including the weight of the container the food is in) by 12. Result will be the weight of one serving.

Nutrition Information

Serving: 1muffin, Calories: 314kcal, Carbohydrates: 26g, Protein: 7g, Fat: 21g, Saturated Fat: 8g, Polyunsaturated Fat: 1g, Monounsaturated Fat: 3g, Trans Fat: 1g, Cholesterol: 67mg, Sodium: 336mg, Potassium: 226mg, Fiber: 5g, Sugar: 12g, Vitamin A: 3375IU, Vitamin C: 1mg, Calcium: 84mg, Iron: 2mg, Net Carbs: 21g

Number of total servings shown is approximate. Actual number of servings will depend on your preferred portion sizes.

 

Nutritional values shown are general guidelines and reflect information for 1 serving using the ingredients listed, not including any optional ingredients. Actual macros may vary slightly depending on specific brands and types of ingredients used.

 

To determine the weight of one serving, prepare the recipe as instructed. Weigh the finished recipe, then divide the weight of the finished recipe (not including the weight of the container the food is in) by the desired number of servings. Result will be the weight of one serving.

© Author: Cheryl Malik

Did you make this recipe?

Tag @40aprons on social and be sure to leave a review on the blog post!

Rate Recipe Tag Me on Instagram
Cheryl Malik

Meet Cheryl Malik

Cheryl Malik is the recipe developer, writer, and photographer behind the healthy, flavorful, family friendly recipes at 40 Aprons. She's been a blogger for 10+ years and is known for her delicious recipes and detailed recipe instructions. Cheryl is a mom of three who lives in Memphis, TN.

Read more...

You may also like...

  • 15 Healthy Pumpkin Recipes for Fall
  • Pumpkin cookies with a maple glaze. These are so insanely healthy but so rich and indulgent! Vegan, gluten free, refined sugar free. They're basically rehab for your seasonal indulgences..
    Healthy Pumpkin Cookies with Glaze (Vegan, GF, Refined Sugar Free)
  • air fryer pumpkin seeds in a dish with a pumpkin on the side
    Air Fryer Pumpkin Seeds

Reader Interactions

Leave a Comment Cancel reply

Have a question? Submit your question or comment below.

Recipe Rating




This site uses Akismet to reduce spam. Learn how your comment data is processed.

  1. Pam says

    Posted on 11/5/20 at 7:36 pm

    Made these for my family tonight and my husband and sons loved them! I’m hiding one for my teatime escape tomorrow! I will be making these again!5 stars

    Reply
    • Savannah | 40 Aprons Team says

      Posted on 11/6/20 at 10:43 am

      Pam, we love “tea time escape”. 🙂5 stars

      Reply
  2. Jazmin says

    Posted on 10/25/20 at 7:20 pm

    These muffins were delicious 😋 I made them tonight and will be making them again. Thank you for sharing the recipe 😀

    Reply
    • Cheryl MalikCheryl Malik says

      Posted on 10/27/20 at 3:19 pm

      I’m so glad, Jazmin! It’s definitely one of my go-to recipes 🙂

      Reply
  3. Clara M says

    Posted on 10/5/20 at 1:23 pm

    These were so yummy! I forgot they were in the I’ve and left them in for like 45 minutes, but surprisingly they were still amazing. I can’t wait to make them again and NOT forget about them 😂

    I also used cassava flour instead of tapioca and it turned out great!5 stars

    Reply
    • Savannah | 40 Aprons Team says

      Posted on 11/4/20 at 9:27 am

      Aw, yay! We are so glad that substitution worked for you. 🙂5 stars

      Reply
  4. Tina Jabbour says

    Posted on 5/19/20 at 8:12 pm

    If I only have almond flour can I use that for all the flour instead of partial almond and coconut?

    Reply
    • Savannah | 40 Aprons Team says

      Posted on 2/23/21 at 9:58 am

      Unfortunately that won’t work as almond flour really needs an additional flour to operate well!5 stars

      Reply
  5. Lindsey says

    Posted on 3/23/20 at 2:01 pm

    Just made these this morning as I have a ton of canned pumpkin stashed away. These are amazingly good! The crumb topping is the perfect texture to the moist pumpkin flavor of the muffins. They’re not too sweet and the pumpkin flavor really shines. I might add more cinnamon next time, but seriously, it’s hard to beat this recipe as is.5 stars

    Reply
    • Cheryl MalikCheryl Malik says

      Posted on 3/23/20 at 2:31 pm

      YAY! I’m so glad you love these as much as we do <35 stars

      Reply
  6. Bianca says

    Posted on 11/13/19 at 4:03 am

    These look incredible, but they are insanely high (per serving) in fat. Any way to get the fat content down without killing the texture completely? Possibly sub applesauce for some of the coconut oil?

    Reply
    • Cheryl MalikCheryl Malik says

      Posted on 11/13/19 at 9:40 am

      That’s mostly coming from the almond flour, really! So if you wanted to try something other than almond flour, that would do it for sure. But the rest of the recipe is based heavily on that flour (which is mostly texture and does not absorb well) so I can’t give any specific recommendations there. You could definitely sub some applesauce for the coconut oil, or maybe a little mashed banana instead, too. Try it and let me know how it goes!5 stars

      Reply
  7. Steve says

    Posted on 11/1/19 at 10:19 am

    Easy to make, moist, tender and delicious! Love these! I used half swerve/half coconut sugar in the batter, and it came out perfectly.5 stars

    Reply
  8. Stephanie says

    Posted on 10/30/19 at 1:13 pm

    Easy and delicious! I made them into mini muffins and they are the perfect bite size treats to take to an event tomorrow (if we don’t eat them all first ?)!5 stars

    Reply
  9. Deanna Cuccia says

    Posted on 10/23/19 at 7:29 pm

    I posted this a few days ago but it’s no longer showing….

    Is there a way to make these lower carb? I’m assuming the tapioca starch is what makes these so high in carbs?

    I also asked if you used an actual muffin man or a cupcake pan? The photos look like cupcake size.

    Reply
    • Cheryl MalikCheryl Malik says

      Posted on 10/24/19 at 7:02 am

      Sorry about that, Deanna! We used a muffin tin for this recipe. 🙂

      You could use coconut flour instead of the almond + tapioca starch.

      Reply
      • Deanna says

        Posted on 10/27/19 at 2:01 pm

        I just finished making these and my batter was more like a dough. they’ve been in the oven for 28 mins now and still aren’t baking, they haven’t risen at all. What happened ???

      • Cheryl MalikCheryl Malik says

        Posted on 10/29/19 at 9:53 am

        OH, no!!! How can we troubleshoot?

    • Steve says

      Posted on 11/1/19 at 10:20 am

      I used half Swerve (erithrytol) and coconut sugar and batter, to reduce carbs – came out great.

      Reply
  10. heather says

    Posted on 10/7/19 at 4:56 pm

    I love all things pumpkin, and I need to make these! They look so moist and delicious!5 stars

    Reply
Older Comments
Newer Comments

Primary Sidebar

What’s Popular?

Reusable meal prep trays with sweet potato, scrambled eggs, and sausage for a whole30 breakfast

Whole30 Breakfast Meal Prep

Crispy, golden air fryer tater tots in a large white serving bowl next to a small ramekin of bright red ketchup.

Air Fryer Tater Tots

Overhead view of marry me chicken in a cast iron skillet

Marry Me Chicken (Chicken in a Sun Dried Tomato Cream Sauce)

Instant pot chicken and rice in a bowl

Dreamy Instant Pot Chicken and Rice

In Season

Whole30 In-n-Out burgers close up

Whole30 Burgers – Burger Joint Style (Paleo, Low Carb)

Overhead photo of keto chicken tortilla soup in a rustic bowl

Keto Chicken Tortilla Soup (Low Carb, Gluten Free)

Air fryer chicken wings on a platter with sauce

Crispy Air Fryer Chicken Wings in Buffalo Sauce

Instant pot frozen chicken breast - easy chicken recipes for dinners with few ingredients

Instant Pot Frozen Chicken Breast

As seen on:

More Goodies + NO Ads!

Become a 40 Aprons Premium Member!

All the 40 Aprons content you love - now even better.

  • Member-Exclusive Recipes
  • Meal Plans & Grocery Lists
  • eBooks
  • NO ADS!
Join now

Privacy Policy

Accessibility

Disclaimers

Contact

© 2023 40 Aprons
Site Credits Designed by Melissa Rose Design Developed by Once Coupled
Back to Top
9361 shares